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<h3>
Chris Lamb pushed to branch master
at <a href="https://salsa.debian.org/reproducible-builds/diffoscope">Reproducible Builds / diffoscope</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/b8236d4a57271dcb4ea5bb985262da268f1b815f">b8236d4a</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T13:00:27Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Don't read the R site and user environment when comparing .rdx, .rdb or .rds files.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/691ce88b7ff264bfeda43da46a6efa5c6a2a480b">691ce88b</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">When formatting command lines for display (eg. as sources of data) ensure newlines and other metacharacters appear escaped as "\n", etc.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/bbfdb57b9c2761cb5bc83c9d7e7c35129e44af85">bbfdb57b</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">When displaying the standard error from commands, ensure we use the escaped version.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/face6fbe3b8f123c089d6d080dd9ea22879de999">face6fbe</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use a ("""-formatted) docstring for our R script to dump variables in .rdb files.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/1f89609e5a56a91c3099dab3b92e05c40a8fb2ef">1f89609e</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Include all R object names are displayed, including ones beginning with a fullstop (".").
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/9f60724183bd895ade3e497dea9e70d7519fed01">9f607241</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Sort package fields when dumping data from R .rdb files.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/9b5c5fd3eaa7925a79d23340a8d4ae5e32ea930e">9b5c5fd3</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add support for easily masking the standard error of commands.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/2e33ad6725d247ad54f6fc06dcc4cc69bc99a8e3">2e33ad67</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use our new MASK_STDERR toggle in the ffprobe comparator.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/0092be09ac8c8947137dbe0dbe2473037fa549fb">0092be09</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Mask/hide standard error when processing R .rdb files.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/cb83076673cbb77c7c033cdb59ec2c415693afca">cb830766</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Don't include useless/misleading "NULL" when dumping data from R .rdb files.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/343d01d46b13cbc917377ceb3fd97b0aded1e651">343d01d4</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Format R .rdb package contents as "foo = bar" rather than using ugly and misleading brackets, etc.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/895f3987f9011d6229efe651929f54ab7e442384">895f3987</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Include the object type when dumping R .rdb data.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/c23651e94c47c25ddf03595ffa0415b101e79231">c23651e9</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Alias the actual object instance.
Gbp-Dch: ignore
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/338dbdf59210e723f31854e1f0860197b856d59f">338dbdf5</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use the newline (etc.) escaped version of the commandline being executed in logging/debug output.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/reproducible-builds/diffoscope/commit/f1e80ca2331dd966fd2489264f6cd4e92a39a874">f1e80ca2</a></strong>
<div>
<span>by Chris Lamb</span>
<i>at 2019-10-24T14:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Expose R .rdb file's absolute paths in the semantic/human-readable output, not in a hexdump.
</pre>
</li>
</ul>
<h4>4 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#d83915d245ac20a549d53ab7b905235ed6dbbf1f">
diffoscope/comparators/ffprobe.py
</a>
</li>
<li class="file-stats">
<a href="#dc22e057f87c5c203d14066645d7164eb8a00499">
diffoscope/comparators/rdata.py
</a>
</li>
<li class="file-stats">
<a href="#29d4e23082d0968e27cc8bdf823f5108d82a361b">
diffoscope/comparators/utils/command.py
</a>
</li>
<li class="file-stats">
<a href="#9547033c62b69f75adb6a7439b10d1c0934542a3">
diffoscope/difference.py
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="d83915d245ac20a549d53ab7b905235ed6dbbf1f">
<a href="https://salsa.debian.org/reproducible-builds/diffoscope/compare/ea4c94a75ddfbf5b967e3c16d4c78ad3fce41212...f1e80ca2331dd966fd2489264f6cd4e92a39a874#d83915d245ac20a549d53ab7b905235ed6dbbf1f"><strong>diffoscope/comparators/ffprobe.py</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -27,16 +27,13 @@ from .utils.command import Command</td>
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<td class="diff-line-num old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"></span>
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<td class="diff-line-num old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC28" class="line" lang="python"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Ffprobe</span><span class="p">(</span><span class="n" style="color: #333;">Command</span><span class="p">):</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC30" class="line" lang="python"> <span class="n" style="color: #333;">MASK_STDERR</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">True</span></span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="python"></span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__init__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">):</span></span>
</pre>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="python"> <span class="nb" style="color: #0086b3;">super</span><span class="p">()</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">__init__</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">)</span></span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="python"></span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">flag</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">False</span></span>
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<td class="diff-line-num old_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="python"></span>
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<td class="diff-line-num old old_line" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">start</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<td class="diff-line-num old old_line" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="python"> <span class="nb" style="color: #0086b3;">super</span><span class="p">()</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">start</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="python"></span>
</pre>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stderr</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">''</span></span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="python"> <span class="o" style="font-weight: 600;">@</span><span class="nb" style="color: #0086b3;">property</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">stdout</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stderr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">splitlines</span><span class="p">(</span><span class="bp" style="color: #999;">True</span><span class="p">)</span></span>
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<li id="dc22e057f87c5c203d14066645d7164eb8a00499">
<a href="https://salsa.debian.org/reproducible-builds/diffoscope/compare/ea4c94a75ddfbf5b967e3c16d4c78ad3fce41212...f1e80ca2331dd966fd2489264f6cd4e92a39a874#dc22e057f87c5c203d14066645d7164eb8a00499"><strong>diffoscope/comparators/rdata.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -32,10 +32,26 @@ import binascii</td>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="python"><span class="n" style="color: #333;">HEADER</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">binascii</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">a2b_hex</span><span class="p">(</span><span class="s" style="color: #d14;">"580a000000020003"</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># has to be one line</span></span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="python"><span class="n" style="color: #333;">DUMP_RDB</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"""lazyLoad(commandArgs(TRUE)); for (obj in ls()) { print(obj); for (line in deparse(get(obj))) cat(line,"</span><span class="se" style="color: #d14;">\\</span><span class="s" style="color: #d14;">n"); }"""</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># unfortunately this above snippet can't detect the build-path differences so</span></span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># diffoscope still falls back to a hexdump</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="python"><span class="n" style="color: #333;">DUMP_RDB</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">r"""</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="python"><span class="s" style="color: #d14;">hideOutput = lazyLoad(commandArgs(TRUE));</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="python"><span class="s" style="color: #d14;">for (x in ls(all.names = TRUE, sorted = TRUE)) {</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="python"><span class="s" style="color: #d14;"> obj = get(x)</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="python"><span class="s" style="color: #d14;"> cat(sprintf("</span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s (</span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s) = ", x, typeof(obj)), sep = "");</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="python"><span class="s" style="color: #d14;"> if (typeof(obj) == "environment") {</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="python"><span class="s" style="color: #d14;"> cat("\n{\n", sep = "");</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="python"><span class="s" style="color: #d14;"> for (y in ls(obj, all.names = TRUE, sorted = TRUE))</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="python"><span class="s" style="color: #d14;"> cat(sprintf(" \"</span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s\" = \"</span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s\"\n", y, get(y, envir = obj)), sep = "");</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="python"><span class="s" style="color: #d14;"> cat("}\n");</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="python"><span class="s" style="color: #d14;"> } else {</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="python"><span class="s" style="color: #d14;"> for (line in deparse(obj))</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="python"><span class="s" style="color: #d14;"> cat(line, "\n", sep = "");</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="python"><span class="s" style="color: #d14;"> }</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="python"><span class="s" style="color: #d14;"> cat("\n");</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="python"><span class="s" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="python"><span class="s" style="color: #d14;">"""</span></span>
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55
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="python"></span>
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56
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="python"><span class="n" style="color: #333;">logger</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">logging</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">getLogger</span><span class="p">(</span><span class="n" style="color: #333;">__name__</span><span class="p">)</span></span>
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57
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="python"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -87,6 +103,7 @@ class RdsReader(Command):</td>
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87
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103
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">cmdline</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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104
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="p">[</span></span>
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105
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="python"> <span class="s" style="color: #d14;">'Rscript'</span><span class="p">,</span></span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="python"> <span class="s" style="color: #d14;">'--no-environ'</span><span class="p">,</span></span>
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107
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="python"> <span class="s" style="color: #d14;">'-e'</span><span class="p">,</span></span>
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91
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108
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<pre style="margin: 0;"> <span id="LC108" class="line" lang="python"> <span class="s" style="color: #d14;">'args <- commandArgs(TRUE); readRDS(args[1])'</span><span class="p">,</span></span>
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92
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109
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">path</span><span class="p">,</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -111,9 +128,11 @@ class RdsFile(File):</td>
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111
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128
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="python"></span>
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112
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129
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">RdbReader</span><span class="p">(</span><span class="n" style="color: #333;">Command</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="python"> <span class="n" style="color: #333;">MASK_STDERR</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">True</span></span>
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="python"> <span class="o" style="font-weight: 600;">@</span><span class="n" style="color: #333;">tool_required</span><span class="p">(</span><span class="s" style="color: #d14;">'Rscript'</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">cmdline</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="p">[</span><span class="s" style="color: #d14;">'Rscript'</span><span class="p">,</span> <span class="s" style="color: #d14;">'-e'</span><span class="p">,</span> <span class="n" style="color: #333;">DUMP_RDB</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">path</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="p">[</span><span class="s" style="color: #d14;">'Rscript'</span><span class="p">,</span> <span class="s" style="color: #d14;">'-<span class="idiff left">-no-environ'</span></span><span class="p"><span class="idiff">,</span></span><span class="idiff"> </span><span class="s" style="color: #d14;"><span class="idiff right">'-</span>e'</span><span class="p">,</span> <span class="n" style="color: #333;">DUMP_RDB</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">path</span><span class="p">]</span></span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC137" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">RdbFile</span><span class="p">(</span><span class="n" style="color: #333;">File</span><span class="p">):</span></span>
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<li id="29d4e23082d0968e27cc8bdf823f5108d82a361b">
<a href="https://salsa.debian.org/reproducible-builds/diffoscope/compare/ea4c94a75ddfbf5b967e3c16d4c78ad3fce41212...f1e80ca2331dd966fd2489264f6cd4e92a39a874#29d4e23082d0968e27cc8bdf823f5108d82a361b"><strong>diffoscope/comparators/utils/command.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -26,15 +26,14 @@ logger = logging.getLogger(__name__)</td>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Command</span><span class="p">(</span><span class="n" style="color: #333;">metaclass</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">abc</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">ABCMeta</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="python"> <span class="n" style="color: #333;">MASK_STDERR</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">False</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python"> <span class="n" style="color: #333;">MAX_STDERR_LINES</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">50</span></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__init__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">path</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_path</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">path</span></span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">start</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="python"> <span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">debug</span><span class="p">(</span></span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="python"> <span class="s" style="color: #d14;">"Executing </span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s"</span><span class="p">,</span> <span class="s" style="color: #d14;">' '</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">join</span><span class="p">([</span><span class="n" style="color: #333;">shlex</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">quote</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">)</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">x</span> <span class="ow" style="font-weight: 600;">in</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">cmdline</span><span class="p">()])</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="python"> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="python"> <span class="n" style="color: #333;">logger</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">debug</span><span class="p">(</span><span class="s" style="color: #d14;">"Executing </span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s"</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">shell_cmdline</span><span class="p">())</span></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_stdin</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stdin</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># "stdin" used to be a feeder but we didn't need the functionality so</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -67,12 +66,15 @@ class Command(metaclass=abc.ABCMeta):</td>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="python"> <span class="k" style="font-weight: 600;">raise</span> <span class="nb" style="color: #0086b3;">NotImplementedError</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">shell_cmdline</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="s" style="color: #d14;">' '</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">join</span><span class="p">(</span></span>
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<pre style="margin: 0;">-<span id="LC71" class="line" lang="python"> <span class="nb" style="color: #0086b3;">map</span><span class="p">(</span></span>
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="python"> <span class="k" style="font-weight: 600;">lambda</span> <span class="n" style="color: #333;">x</span><span class="p">:</span> <span class="s" style="color: #d14;">'{}'</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">==</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">path</span> <span class="k" style="font-weight: 600;">else</span> <span class="n" style="color: #333;">shlex</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">quote</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">),</span></span>
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="python"> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">cmdline</span><span class="p">(),</span></span>
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="python"> <span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="python"> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">fn</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">==</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">path</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="s" style="color: #d14;">'{}'</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="python"> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">repr</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="s" style="color: #d14;">' '</span> <span class="ow" style="font-weight: 600;">not</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">x</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="python"> <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">x</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="p">:</span><span class="o" style="font-weight: 600;">-</span><span class="mi" style="color: #099;">1</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">x</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="s" style="color: #d14;">' '</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">join</span><span class="p">(</span><span class="n" style="color: #333;">fn</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">)</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">x</span> <span class="ow" style="font-weight: 600;">in</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">cmdline</span><span class="p">())</span></span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">env</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">None</span> <span class="c1" style="color: #998; font-style: italic;"># inherit parent environment by default</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -88,6 +90,9 @@ class Command(metaclass=abc.ABCMeta):</td>
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90
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="python"> <span class="k" style="font-weight: 600;">pass</span></span>
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91
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">_read_stderr</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">MASK_STDERR</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="s" style="color: #d14;">""</span></span>
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="python"> <span class="n" style="color: #333;">buf</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">""</span></span>
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97
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="python"> <span class="n" style="color: #333;">lines</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">_process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stderr</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">splitlines</span><span class="p">(</span><span class="bp" style="color: #999;">True</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="python"></span>
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<a href="https://salsa.debian.org/reproducible-builds/diffoscope/compare/ea4c94a75ddfbf5b967e3c16d4c78ad3fce41212...f1e80ca2331dd966fd2489264f6cd4e92a39a874#9547033c62b69f75adb6a7439b10d1c0934542a3"><strong>diffoscope/difference.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -296,12 +296,12 @@ class Difference:</td>
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="python"></span>
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297
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297
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<pre style="margin: 0;"> <span id="LC297" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">command1</span> <span class="ow" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">command1</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stderr</span><span class="p">:</span></span>
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298
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298
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="python"> <span class="n" style="color: #333;">difference</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">add_comment</span><span class="p">(</span></span>
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299
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="python"> <span class="s" style="color: #d14;">"stderr from `{}`:"</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">format</span><span class="p">(</span><span class="s" style="color: #d14;"><span class="idiff left">' '</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">join</span></span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">command1</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">cmdline</span></span><span class="p"><span class="idiff right">()</span>))</span></span>
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299
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="python"> <span class="s" style="color: #d14;">"stderr from `{}`:"</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">format</span><span class="p">(</span><span class="n" style="color: #333;"><span class="idiff left">command1</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">shell_cmdline</span></span><span class="p"><span class="idiff right">(</span>))</span></span>
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="python"> <span class="p">)</span></span>
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301
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="python"> <span class="n" style="color: #333;">difference</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">add_comment</span><span class="p">(</span><span class="n" style="color: #333;">command1</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stderr</span><span class="p">)</span></span>
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302
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">command2</span> <span class="ow" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">command2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stderr</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="python"> <span class="n" style="color: #333;">difference</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">add_comment</span><span class="p">(</span></span>
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304
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<pre style="margin: 0;">-<span id="LC304" class="line" lang="python"> <span class="s" style="color: #d14;">"stderr from `{}`:"</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">format</span><span class="p">(</span><span class="s" style="color: #d14;"><span class="idiff left">' '</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">join</span></span><span class="p"><span class="idiff">(</span></span><span class="n" style="color: #333;"><span class="idiff">command2</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">cmdline</span></span><span class="p"><span class="idiff right">()</span>))</span></span>
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<pre style="margin: 0;">+<span id="LC304" class="line" lang="python"> <span class="s" style="color: #d14;">"stderr from `{}`:"</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">format</span><span class="p">(</span><span class="n" style="color: #333;"><span class="idiff left">command2</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">shell_cmdline</span></span><span class="p"><span class="idiff right">(</span>))</span></span>
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305
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<pre style="margin: 0;"> <span id="LC305" class="line" lang="python"> <span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC306" class="line" lang="python"> <span class="n" style="color: #333;">difference</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">add_comment</span><span class="p">(</span><span class="n" style="color: #333;">command2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">stderr</span><span class="p">)</span></span>
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307
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<pre style="margin: 0;"> <span id="LC307" class="line" lang="python"></span>
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